USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: ARF1_HUMAN USC-OGP 2-DE database:  ARF1_HUMAN ARF1_HUMAN General information about the entry View entry in simple text format Entry name ARF1_HUMAN Primary accession number P84077 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=ADP-ribosylation factor 1;. Gene name Name=ARF1 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1316: pI=6.18; Mw=19834 Cross-references UniProtKB/Swiss-Prot P84077; ARF1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name ARF1_HUMAN Primary accession number P84077 Secondary accession number(s) P10947 P32889 Sequence was last modified on  January 23, 2007 (version 2) Annotations were last modified on  March 15, 2017 (version 151) Name and origin of the protein Description RecName: Full=ADP-ribosylation factor 1; Gene name Name=ARF1 Encoded on Name=ARF1 Keywords 3D-structure; Acetylation; Cell junction; Cell membrane; Complete proteome; Cytoplasm; Direct protein sequencing; ER-Golgi transport; Golgi apparatus; GTP-binding; Lipoprotein; Membrane; Myristate; Nucleotide-binding; Postsynaptic cell membrane; Protein transport; Reference proteome; Synapse; Synaptosome; Transport. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL M36340; AAA35552.1; -; mRNA EMBL M84326; AAA35512.1; -; mRNA EMBL AF052179; AAC28623.1; -; mRNA EMBL AF055002; AAC09356.1; -; mRNA EMBL AF493881; AAM12595.1; -; mRNA EMBL BT007393; AAP36057.1; -; mRNA EMBL AL136379; CAI23120.1; -; Genomic_DNA EMBL BC009247; AAH09247.1; -; mRNA EMBL BC010429; AAH10429.1; -; mRNA EMBL BC011358; AAH11358.1; -; mRNA EMBL M84332; AAA35511.1; -; Genomic_DNA CCDS CCDS1565.1; -; . PIR B40187; A33283; . RefSeq NP_001019397.1; NM_001024226.1; . RefSeq NP_001019398.1; NM_001024227.1; . RefSeq NP_001019399.1; NM_001024228.1; . RefSeq NP_001649.1; NM_001658.3; . UniGene Hs.286221; -; . PDB 1HUR; X-ray; 2.00 A; A/B=2-181 PDB 1RE0; X-ray; 2.40 A; A=18-181 PDB 1U81; NMR; -; A=18-181 PDB 3O47; X-ray; 2.80 A; A/B=11-181 PDB 4HMY; X-ray; 7.00 A; C=17-181 PDBsum 1HUR; -; . PDBsum 1RE0; -; . PDBsum 1U81; -; . PDBsum 3O47; -; . PDBsum 4HMY; -; . ProteinModelPortal P84077; -; . SMR P84077; -; . BioGrid 106870; 80; . DIP DIP-31597N; -; . IntAct P84077; 28; . MINT MINT-4999599; -; . STRING 9606.ENSP00000272102; -; . BindingDB P84077; -; . ChEMBL CHEMBL5985; -; . DrugBank DB04077; Glycerol; . DrugBank DB04121; Guanosine-3'-Monophosphate-5'-Diphosphate; . DrugBank DB04315; Guanosine-5'-Diphosphate; . DrugBank DB04137; Guanosine-5'-Triphosphate; . DrugBank DB08231; MYRISTIC ACID; . iPTMnet P84077; -; . PhosphoSitePlus P84077; -; . SwissPalm P84077; -; . BioMuta ARF1; -; . DMDM 51316985; -; . EPD P84077; -; . MaxQB P84077; -; . PaxDb P84077; -; . PeptideAtlas P84077; -; . PRIDE P84077; -; . TopDownProteomics P84077; -; . DNASU 375; -; . Ensembl ENST00000272102; ENSP00000272102; ENSG00000143761; . Ensembl ENST00000540651; ENSP00000442980; ENSG00000143761; . Ensembl ENST00000541182; ENSP00000440005; ENSG00000143761; . GeneID 375; -; . KEGG hsa:375; -; . UCSC uc001hrr.4; human; . CTD 375; -; . DisGeNET 375; -; . GeneCards ARF1; -; . GeneCards MIR3620; -; . H-InvDB HIX0116279; -; . HGNC HGNC:652; ARF1; . HPA CAB007742; -; . MIM 103180; gene; . neXtProt NX_P84077; -; . OpenTargets ENSG00000143761; -; . PharmGKB PA24934; -; . eggNOG KOG0070; Eukaryota; . eggNOG COG1100; LUCA; . GeneTree ENSGT00780000121855; -; . HOGENOM HOG000163691; -; . HOVERGEN HBG002073; -; . InParanoid P84077; -; . KO K07937; -; . OMA ALRHRNW; -; . OrthoDB EOG091G0S7S; -; . PhylomeDB P84077; -; . TreeFam TF300808; -; . Reactome R-HSA-1660499; Synthesis of PIPs at the plasma membrane; . Reactome R-HSA-1660514; Synthesis of PIPs at the Golgi membrane; . Reactome R-HSA-167590; Nef Mediated CD4 Down-regulation; . Reactome R-HSA-2132295; MHC class II antigen presentation; . Reactome R-HSA-421837; Clathrin derived vesicle budding; . Reactome R-HSA-432720; Lysosome Vesicle Biogenesis; . Reactome R-HSA-432722; Golgi Associated Vesicle Biogenesis; . Reactome R-HSA-6807878; COPI-mediated anterograde transport; . Reactome R-HSA-6811434; COPI-dependent Golgi-to-ER retrograde traffic; . Reactome R-HSA-6811438; Intra-Golgi traffic; . ChiTaRS ARF1; human; . EvolutionaryTrace P84077; -; . GeneWiki ARF1; -; . GenomeRNAi 375; -; . PRO PR:P84077; -; . Proteomes UP000005640; Chromosome 1; . Bgee ENSG00000143761; -; . CleanEx HS_ARF1; -; . ExpressionAtlas P84077; baseline and differential; . Genevisible P84077; HS; . GO GO:0031252; C:cell leading edge; IDA:UniProtKB; . GO GO:0030137; C:COPI-coated vesicle; IEA:Ensembl; . GO GO:0005829; C:cytosol; TAS:Reactome; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0005925; C:focal adhesion; IDA:UniProtKB; . GO GO:0000139; C:Golgi membrane; TAS:Reactome; . GO GO:0005770; C:late endosome; IEA:Ensembl; . GO GO:0043005; C:neuron projection; IEA:UniProtKB-SubCell; . GO GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell; . GO GO:0005778; C:peroxisomal membrane; IEA:Ensembl; . GO GO:0005886; C:plasma membrane; TAS:ProtInc; . GO GO:0014069; C:postsynaptic density; IEA:UniProtKB-SubCell; . GO GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-KW; . GO GO:0030017; C:sarcomere; IEA:Ensembl; . GO GO:0005802; C:trans-Golgi network; IEA:Ensembl; . GO GO:0019003; F:GDP binding; IEA:Ensembl; . GO GO:0005525; F:GTP binding; IEA:UniProtKB-KW; . GO GO:0003924; F:GTPase activity; TAS:Reactome; . GO GO:0000287; F:magnesium ion binding; IEA:Ensembl; . GO GO:1990583; F:phospholipase D activator activity; IEA:Ensembl; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0005057; F:signal transducer activity; downstream of receptor; TAS:ProtInc GO GO:0007015; P:actin filament organization; IEA:Ensembl; . GO GO:0019886; P:antigen processing and presentation of exogenous peptide antigen via MHC class II; TAS:Reactome; . GO GO:0006878; P:cellular copper ion homeostasis; IMP:UniProtKB; . GO GO:0097061; P:dendritic spine organization; ISS:UniProtKB; . GO GO:0055108; P:Golgi to transport vesicle transport; IEA:Ensembl; . GO GO:0060292; P:long term synaptic depression; ISS:UniProtKB; . GO GO:0097212; P:lysosomal membrane organization; IEA:Ensembl; . GO GO:0006661; P:phosphatidylinositol biosynthetic process; TAS:Reactome; . GO GO:0045956; P:positive regulation of calcium ion-dependent exocytosis; IEA:Ensembl; . GO GO:0060999; P:positive regulation of dendritic spine development; IEA:Ensembl; . GO GO:0045807; P:positive regulation of endocytosis; IEA:Ensembl; . GO GO:1902953; P:positive regulation of ER to Golgi vesicle-mediated transport; IEA:Ensembl; . GO GO:1902824; P:positive regulation of late endosome to lysosome transport; IEA:Ensembl; . GO GO:0050714; P:positive regulation of protein secretion; IEA:Ensembl; . GO GO:1902307; P:positive regulation of sodium ion transmembrane transport; IEA:Ensembl; . GO GO:0006892; P:post-Golgi vesicle-mediated transport; TAS:Reactome; . GO GO:0015031; P:protein transport; IEA:UniProtKB-KW; . GO GO:0034315; P:regulation of Arp2/3 complex-mediated actin nucleation; ISS:UniProtKB; . GO GO:0050690; P:regulation of defense response to virus by virus; TAS:Reactome; . GO GO:1903725; P:regulation of phospholipid metabolic process; IEA:Ensembl; . GO GO:0002090; P:regulation of receptor internalization; ISS:UniProtKB; . GO GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro; . GO GO:0070142; P:synaptic vesicle budding; IEA:Ensembl; . GO GO:0034379; P:very-low-density lipoprotein particle assembly; IEA:Ensembl; . Gene3D 3.40.50.300; -; 1; . InterPro IPR027417; P-loop_NTPase; . InterPro IPR005225; Small_GTP-bd_dom; . InterPro IPR024156; Small_GTPase_ARF; . InterPro IPR006689; Small_GTPase_ARF/SAR; . Pfam PF00025; Arf; 1; . PRINTS PR00328; SAR1GTPBP; . SUPFAM SSF52540; SSF52540; 1; . TIGRFAMs TIGR00231; small_GTP; 1; . PROSITE PS51417; ARF; 1; .

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